Publications from GoogleScholar
Publications from Scopus
Publications from ResearcherID

1. Peer-reviewed journal articles (International Journals)

(lab members are in bold, *corresponding author)

-In review-

Yang, X., Shi, H., Stovall, A., Guan, K., Miao, G., Zhang, Y., Zhang, Y., Xiao, X., Ryu, Y., & Lee, J.-E. (2018). FluoSpec 2 – An automated field spectroscopy system to monitor canopy solar-induced fluorescence. Remote Sensing, In review

Luo, X., Keenan, T.F., Fisher, J.B., Jiménez, J.-C., Jiang, C., Perakalapudi, N.-V., Ryu, Y., & Tadic, J.M. (2018). The impact of the 2015-2016 El Niño on global photosynthesis using satellite remote sensing. Philosophical Transactions of the Royal Society B-Biological Sciences, In review

Baldocchi, D.D., Dralle, D., Queen, G.d.s., Jiang, C., & Ryu, Y. (2017). How Much Water is Evaporated Across California?: A Multi-Year Assessment Using a Biophysical Model Forced with Satellite Remote Sensing Data. Environmental Research Letters, In review


-In revision-

Kim, J., Ryu, Y.*, Hwang, Y., & Jiang, C. (2018). Continuous observation of vegetation indices, fraction of absorbed photosynthetically active radiation, and leaf area index using an integrated low-cost near-surface remote sensing system. Agricultural and Forest Meteorology, In revision

Yang, K., Ryu, Y.*, Dechant, B., Berry, J.A., Hwang, Y., Jiang, C., Kang, M., Kim, J., Kimm, H., Kornfeld, A., & Yang, X. (2018). Sun-induced chlorophyll fluorescence is more strongly related to absorbed photosynthetically active radiation than gross primary productivity in a rice paddy. Remote Sensing of Environment, In review after revision




[42] Huang, Y., Ryu, Y.*, Jiang, C., Kimm, H., Kim, S., Kang, M., & Shim, K. (2018). BESS-Rice: A remote sensing derived and biophysical process-based rice productivity simulation model. Agricultural and Forest Meteorology, 256–257, 253-269 [HTML]  [PDF] (2018.06)

[41] Filippa, G., Cremonese, E., Migliavacca, M., Galvagno, M., Sonnentag, O., Humphreys, E., Hufkens, K., Ryu, Y., Verfaillie, J., Morra di Cella, U., & Richardson, A.D. (2018). NDVI derived from near-infrared-enabled digital cameras: Applicability across different plant functional types. Agricultural and Forest Meteorology, 249, 275-285 [HTML] [PDF] (2018.02)

[40] Ryu, Y.*, Jiang, C., Kobayashi, H., & Detto, M. (2018). MODIS-derived global land products of shortwave radiation and diffuse and total photosynthetically active radiation at 5 km resolution from 2000. Remote Sensing of Environment, 204, 812-825 [HTML]  [PDF] (2018.01)


[39] Bae, J., & Ryu, Y.* (2017). Spatial and temporal variations in soil respiration among different land cover types under wet and dry years in an urban park. Landscape and Urban Planning, 167, 378–385 [HTML] [PDF] (2017.11)

[38] Whitley, R., Beringer, J., Hutley, L.B., Abramowitz, G., De Kauwe, M.G., Evans, B., Haverd, V., Li, L., Moore, C., Ryu, Y., Scheiter, S., Schymanski, S.J., Smith, B., Wang, Y.P., Williams, M., & Yu, Q. (2017). Challenges and opportunities in land surface modelling of savanna ecosystems. Biogeosciences, 14, 4711-4732 [HTML] [PDF] (2017.10)

[37] Jiang, C., Ryu, Y.*, Fang, H., Myneni, R., Claverie, M., & Zhu, Z. (2017). Inconsistencies of interannual variability and trends in long-term satellite leaf area index products. Global Change Biology, 23, 4133-4146 [HTML] [PDF] (2017.10)

[36] Vargas, R., Alcaraz-Segura, D., Birdsey, R., Brunsell, N.A., Cruz-Gaistardo, C.O., de Jong, B., Etchevers, J., Guevara, M., Hayes, D.J., Johnson, K., Loescher, H.W., Paz, F., Ryu, Y., Sanchez-Mejia, Z., & Toledo-Gutierrez, K.P. (2017). Enhancing interoperability to facilitate implementation of REDD+: case study of Mexico. Carbon Management, 8, 57-65 [HTML] [PDF] (2017.02)

[35] Akuraju, V.R., Ryu, D., George, B., Ryu, Y., Dassanayake, K. (2017) Seasonal and inter-annual variability of soil moisture stress function in dryland wheat field, Australia. Agricultural and Forest Meteorology 232, 489-499 [HTML] [PDF] (2017.01)


[34] Jiang, C., Ryu, Y.* (2016) Multi-scale evaluation of global gross primary productivity and evapotranspiration products derived from Breathing Earth System Simulator (BESS). Remote Sensing of Environment 186, 528-547 [HTML] [PDF] (2016.12)

[33] Baldocchi, D., Ryu, Y., Keenan, T. (2016) Terrestrial Carbon Cycle Variability F1000Research, 5(F1000 Faculty Rev):2371. [HTML] [PDF] (2016.09)

[32] Verma, M., Fisher, J., Mallick, K., Ryu, Y., Kobayashi, H., Guillaume, A., Moore, G., Ramakrishnan, L., Hendrix, V., Wolf, S., Sikka, M., Kiely, G., Wohlfahrt, G., Gielen, B., Roupsard, O., Toscano, P., Arain, A., Cescatti, A. (2016) Global Surface Net-Radiation at 5 km from MODIS Terra. Remote Sensing 8, 739 [HTML] [PDF] (2016.09)

[31] Whitley, R., Beringer, J., Hutley, L.B., Abramowitz, G., De Kauwe, M.G., Duursma, R., Evans, B., Haverd, V., Li, L., Ryu, Y., Smith, B., Wang, Y.P., Williams, M., Yu, Q. (2016) A model inter-comparison study to examine limiting factors in modelling Australian tropical savannas. Biogeosciences 13, 3245-3265 [HTML] [PDF]  (2016.06)

[30] Hwang, Y., Ryu, Y.*, Kimm, H., Jiang, C., Lang, M., Macfarlane, C., Sonnentag, O. (2016) Correction for light scattering combined with sub-pixel classification improves estimation of gap fraction from digital cover photography. Agricultural and Forest Meteorology 222, 32-44 [HTML[PDF] (2016.05)

[29] Pisek, J., Chen, J.M., Kobayashi, H., Rautiainen, M., Schaepman, M.E., Karnieli, A., Sprinstin, M., Ryu, Y., Nikopensius, M., Raabe, K. (2016) Retrieval of seasonal dynamics of forest understory reflectance from semiarid to boreal forests using MODIS BRDF data. Journal of Geophysical Research: Biogeosciences 121, 855-863. [HTML[PDF] (2016.03)

[28] He, L., Liu, J., Chen, J.M., Croft, H., Wang, R., Sprintsin, M., Zheng, T., Ryu, Y., Pisek, J., Gonsamo, A., Deng, F., & Zhang, Y. (2016). Inter- and intra-annual variations of clumping index derived from the MODIS BRDF product. International Journal of Applied Earth Observation and Geoinformation, 44, 53-60 [HTML[PDF] (2016.02)

[27] Lee, S., Ryu, Y.*, Jiang, C. (2015) Urban heat mitigation by roof surface materials during the East Asian summer monsoon. Environmental Research Letters 10, 124012  [HTML[PDF] (2015.12)

[26] Kimm, H., Ryu, Y.* (2015) Seasonal variations in photosynthetic parameters and leaf area index in an urban park. Urban Forestry & Urban Greening 14, 1059-1067  [HTML[PDF] (2015.12)

[25] Song, Y., & Ryu, Y.* (2015). Seasonal changes in vertical canopy structure in a temperate broadleaved forest in Korea. Ecological Research, 30, 821-831 [HTML[PDF] (2015. 9)

[24] Ke, Y., Im, J., Lee, J., Gong, H., & Ryu, Y. (2015). Characteristics of Landsat 8 OLI-derived NDVI by comparison with multiple satellite sensors and in-situ observations. Remote Sensing of Environment, 164: 298-313 [HTML[PDF] (2015. 7)

[23] Kim, S., & Ryu, Y. (2015). Describing the spatial patterns of heat vulnerability from urban design perspectives. International Journal of Sustainable Development & World Ecology, 22(3): 189-200 [HTML[PDF] (2015. 3)

[22] Bae, J., & Ryu, Y.* (2015). Land use and land cover changes explain spatial and temporal variations of the soil organic carbon stocks in a constructed urban park. Landscape and Urban Planning, 136, 57-67 [HTML[PDF] (2015. 4)

[21] Song, Y., Ryu, Y.*, & Jeon, S. (2014). Interannual variability of regional evapotranspiration under precipitation extremes: A case study of the Youngsan River basin in Korea. Journal of Hydrology, 519, 3531-3540 [HTML[PDF] (2014. 11)

[20] Macfarlane, C., Ryu, Y., Ogden, G.N., & Sonnentag, O. (2014). Digital camera photography: exposed and in the raw. Agricultural and Forest Meteorology, 197, 244-253 [HTML[PDF] (2014. 10)

[19] Ryu, Y.*, Lee, G., Jeon, S., Song, Y., & Kimm, H. (2014). Monitoring multi-layer canopy spring phenology of temperate deciduous and evergreen forests using low-cost spectral sensors. Remote Sensing of Environment, 149, 227-238 [HTML[PDF] (2014. 6)

[18] Hendrix, V., Ramakrishnan, L., Ryu, Y., van Ingen, C., Jackson, K.R., & Agarwal, D. (2014). CAMP: Community Access MODIS Pipeline. Future Generation Computer Systems, 36, 418-429  [HTML[PDF] (2014. 7)

[17] Pisek, J., Ryu, Y., Sprintsin, M., He, L., Oliphant, A.J., Korhonen, L., Kuusk, J., Kuusk, A., Bergstrom, R., Verrelst, J., & Alikas, K. (2013). Retrieving vegetation clumping index from Multi-angle Imaging SpectroRadiometer (MISR) data at 275 m resolution. Remote Sensing of Environment, 138, 126-133 [HTML[PDF] (2013. 11)

[16] Kobayashi, H., Ryu, Y.*, Baldocchi, D.D., Welles, J.M., & Norman, J.M. (2013). On the correct estimation of gap fraction: how to remove scattered radiation in the gap fraction measurements? Agricultural and Forest Meteorology, 174-175: 170-183 [HTML[PDF] (2013. 6)

[15] Richardson, A.D., Keenan, T.F., Migliavacca, M., Ryu, Y., Sonnentag, O., & Toomey, M. (2013). Climate change, phenology, and phenological control of vegetation feedbacks to the climate system. Agricultural and Forest Meteorology, 169: 156-173  [HTML[PDF] (2013. 2)


[14] Ryu, Y.*, Verfaillie, J., Macfarlane, C., Kobayashi, H., Sonnentag, O., Vargas, R., Ma, S., & Baldocchi, D.D. (2012). Continuous observation of tree leaf area index at ecosystem scale using upward-pointing digital cameras. Remote Sensing of Environment, 126, 116-125 [HTML[PDF] (2012. 11)

[13] Keenan,T.F., Baker, I., Barr, A., Ciais, P., Davis, K., Dietze, M., Dragoni, D., Gough, C.M., Grant, R., Hollinger, D., Hufkens, K., Poulter, B., McCaughey, H., Rackza, B., Ryu, Y., Schaefer, K., Tian, H., Verbeeck, H., Zhao, M. & Richardson, A. (2012) Terrestrial biosphere model performance for inter-annual variability of land-atmosphere CO2 exchange. Global Change Biology 18(6): 1971–1987 [HTML[PDF] (2012. 6)

[12] Ryu, Y.*, Baldocchi, D.D., Black, T.A., Detto, M., Law, B.E.,Leuning, R., Miyata, A., Reichstein, M., Vargas, R., Ammann, C., Beringer, J., Flanagan, L.B., Gu, L., Hutley, L.B., Kim, J., McCaughey, H., Moors, E.J., Rambal, S. & Vesala, T. (2012) On the temporal upscaling of evapotranspiration from instantaneous remote sensing measurements to 8-day mean daily-sums. Agricultural and Forest Meteorology, 152, 212-222. [HTML[PDF] (2012. 1)

[11] Kobayashi, H., Baldocchi, D.D., Ryu, Y., Chen, Q., Ma, S., Osuna, J.L. & Ustin, S.L. (2012) Modeling energy and carbon fluxes in a heterogeneous oak woodland: A three-dimensional approach. Agricultural and Forest Meteorology, 152, 83-100. [HTML[PDF] (2012. 1)

[10] Ryu Y*, Baldocchi DD, Kobayashi H, van Ingen C, LiJ, Black TA, Beringer J, van Gorsel E, Knohl A, Law BE & Roupsard O (2011) Integration of MODIS land and atmosphere products with a coupled-process model to estimate gross primary productivity and evapotranspiration from 1 km to global scales. Global Biogeochemical Cycles, 25, GB4017, doi:10.1029/2011GB004053 [HTML[PDF] (2011. 12)

[9] Pisek, J., Ryu, Y. and Alikas, K., 2011. Estimating leaf inclination and G-function from leveled digital camera photography in broadleaf canopies. Trees – Structure and Function, 25: 919-924 [HTML[PDF] (2011. 10)

[8] Agarwal, D., Cheah, Y.-W., Fay, D., Fay, J., Guo, D., Hey, T., Humphrey, M., Jackson, K., Lie, J., Poulain, C., Ryu, Y. and van Ingen, C., 2011. Data-Intensive Science: The Terapixel and MODISAzure Projects. International Journal of High Performance Computing Applications, 25(3): 304-316 [HTML] [PDF] (2011. 8)

[7] Sonnentag, O., Detto, M., Vargas, R., Ryu, Y., Runkle, B.R., Kelly, N.M. and Baldocchi, D.D., 2011. Tracking the structural and functional development of a perennial pepperweed (Lepidium latifolium L.) infestation using a multi-year archive of webcam imagery and eddy covariance measurements. Agricultural and Forest Meteorology, 151(7), 916-926 [HTML[PDF] (2011. 7)

[6] Ryu, Y.*,Baldocchi, D.D., Verfaillie, J., Ma, S., Falk, M., Ruiz-Mercado, Il, Hehn, T., Sonnentag, O. (2010). Testing the performance of a novel spectral reflectance sensor, built with light emitting diodes (LEDs), to monitor ecosystem metabolism, structure and function. Agricultural and Forest Meteorology. 150, 1597-1606 [HTML[PDF] (2010. 12)

[5] Ryu, Y.*, Nilson, T.,Kobayashi, H., Sonnentag, O., Law, B.E., & Baldocchi, D.D. 2010. On the correct estimation of effective leaf area index: does it reveal information on clumping effects? Agricultural and Forest Meteorology, 150, 463-472 [HTML] [PDF] (2010. 3)

[4] Ryu, Y.*, Sonnentag, O., Nilson,T., Vargas, R., Kobayashi, H., Wenk, R., & Baldocchi, D.D. 2010. How to quantify tree leaf area index in an open savanna ecosystem: A multi-instrument and multi-model approach. Agricultural and Forest Meteorology, 150, 63-76 [HTML[PDF] (2010. 1)

[3] Ryu, Y.*, Kim, S., and Lee, D. 2009. The influence of wind flows on thermal comfort in the Daechung of a traditional Korean house. Building and Environment, 44, 18-26 [HTML[PDF] (2009. 1)

[2] Ryu, Y., Kang, S., Moon, S.K.,& Kim, J. 2008. Evaluation of land surface radiation balance derived from Moderate Resolution Imaging Spectrometer (MODIS) over complex terrain and heterogeneous landscape on clear sky days. Agricultural and Forest Meteorology, 148, 1538-1552 [HTML[PDF] (2008. 9)

[1] Ryu, Y.*, Baldocchi, D., Ma, S., and Hehn, T. 2008. Interannual variability of evapotranspiration and energy exchanges over an annual grassland in California. Journal of Geophysical Research-Atmospheres 113(D09104): doi:10.1029/2007JD009263  [HTML] [PDF] (2008. 5)


2. Peer-reviewed journal articles (Korean journals)

[1] Moon, S., Ryu, Y., Lee, D., Kim, J, Lim, J.H. 2007. Quantifying the spatial heterogeneity of the land surface parameters at the two contrasting KoFlux sites by semivariogram. Korean Journal of Agricultural and Forest Meteorology 9(2): 140-148


3. Peer-reviewed conference articles (computer science)

[3] Humphrey, M., Hill, Z., van Ingen, C., Jackson, K., Ryu, Y. 2011. Assessing the Value of Cloudbursting: A Case Study of Satellite Image Processing on Windows Azure. In IEEE e-Science 2011 Conference. Stockholm, Sweden. [PDF]

[2] Li, J., Humphrey, M., Cheah, Y.-W., Ryu, Y., Agarwal, D., Jackson, K. and van Ingen, C., 2010. Fault Tolerance and Scaling in e-Science Cloud Applications: Observations from the Continuing Development of MODISAzure, IEEE e-Science 2010 Conference, Brisbane, Australia.[PDF]

[1] Li, J., Humphrey, M., Agarwal, D., Jackson, K., van Ingen, C. and Ryu, Y., 2010. eScience in the cloud: A MODIS satellite data reprojection and reduction pipeline in the Windows Azure platform, Parallel & Distributed Processing (IPDPS), 2010 IEEE International Symposium on, pp. 1-10.[PDF]


4. Thesis

Ryu, Y. 2010. Near-surface remote sensing of canopy architecture and land-atmosphere interactions in an oak savanna ecosystem. PhD Dissertation. UC Berkeley [PDF]

Ryu, Y. 2005. Horizontal wind flows over Daechung as affected by spatial differentiation of thermal and turbulent environments within a traditional Korean dwelling. Master Thesis. Seoul National University.


5. Books

[4] Baldocchi, D.D. and Ryu, Y., 2011. A Synthesis of Forest Evaporation Fluxes from Days to Years as Measured with Eddy Covariance In: D.F. Levia, D.E. Carlyle-Moses and T. Tanaka (Editors), Forest Hydrology and Biogeochemistry: Synthesis of Past Research and Future Directions. Springer-Verlag, Heidelberg, Germany. [PDF]

[3] Baldocchi, D.D. Chen, Q., Chen, X., Ma, S., Miller, G., Ryu, Y., Xiao, J., Wenk, R. and Battles, J. 2010 The Dynamics of Energy, Water and Carbon Fluxes in a Blue Oak (Quercus douglasii) Savanna in California, USA, In: Ecosystem Function in Global Savannas: Measurement and Modeling at Landscape to Global Scales – edited by Michael J. Hill and Niall P. Hanan andpublished by CRC/Taylor and Francis.[PDF]

[2] Ryu, Y. and Lee, D. 2008. Ecological implications of thermal and turbulent environments within a traditional Korean home, in Korean Traditional Ecology II (D. Lee Ed.), Science Books, Seoul

[1] Ryu, Y. 2006. History and perspectives for landscape architecture planning, in L·A· n·D (D. Kim, K. Cho, Y. Lee, Y. Kim, and J. Pae Eds.), Landscape Architecture, Paju: 326-339.